Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951411.1_cds_XP_016491440.1_81758
CDS Infomation

[gene=LOC107811088] [db_xref=GeneID:107811088] [protein=E3 ubiquitin-protein ligase RING1-like] [protein_id=XP_016491440.1] [location=181126..182157] [gbkey=CDS]
Sequence

ATGGATGGAAGAGGAGCATCAAGATATTGGTGTCATCAGTGTTCAAGGAGGGTGGACCCC
GCAATGGAGGTGGAATTGAAATGTCCCATTTGTCAACAAGGTTTTGTTGAGGAAATGGGA
TCAGAAACTGCTCTTGAAAATGATTTGGGAGGGTCCGACTCTGATCGTGCCCTCACGCTA
TGGGCGCCAATCTTGTTAGGCATGATGAGCAACCCTCGTCGTCGTCGATCCAGGTTTAGG
CATCATCTCGAATTTGATAGTGATGATGATGATGATCATACTCGTGAAGGGGGAGAGACT
GAACTTGATCCTGAGCTGGCATCTATAATGAATAGGCGGAGGAGGAACTCTGCCACTATT
CTCCAGCTCTTGCAAAGTATTCGAGCTGGAATGGAGAATGCTGACGGTGAAAATAGTAGG
GAGACTGTTAGGGATGGTGAGGAGCGTGTGATACTTGTAAATCCGTTCAATCAAACCATC
ATTGTGCAGGGTTCTTATGATTCGGATAATAATGACCGACCCATTGGCTCATTGGGTGAT
TATTTCATTGGTCCTGGTTTAGACATGTTGCTGCAACATTTGGCAGAGAATGATCCGAAT
AGGTATGGTACTCCACCAGCTCAAAAAGAGGCTGTAGAGGCGTTGCCTGCGGTGAAAATT
GACGAGACACTGCAGTGTTCCGTGTGTTTGGAAGACTTTGAGATTGGGACTGAAGCCAAA
GAGATGCCTTGTAAGCACAAGTTTCACAGCGAGTGTATCTTACCGTGGCTGGAGCTTCAT
AGCACCTGTCCAGTCTGTAGGCACCAGTTGCCCTCTGATGAATCAAAAGTTGAGAATGTC
ACTGGTAACACAAATGCTGCTCAGAGTAGTGATACAAGGAATGAAAACGGTCGACGTTTT
CCAGTGTCGCTTCCATGGCCTTTGAGTGGTTTGTTTACATCAGGTACCCAATCTAGTAAT
GGAAATTCATCATCAACGACTACTTCTTCATCAGGAAATGCAAACTCAAATGCTCATATG
CATGATGATTAG

Peptide Sequence

PEP ID

XP_016491440.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nicotiana tabacum]
Sequence

MDGRGASRYWCHQCSRRVDPAMEVELKCPICQQGFVEEMGSETALENDLGGSDSDRALTL
WAPILLGMMSNPRRRRSRFRHHLEFDSDDDDDHTREGGETELDPELASIMNRRRRNSATI
LQLLQSIRAGMENADGENSRETVRDGEERVILVNPFNQTIIVQGSYDSDNNDRPIGSLGD
YFIGPGLDMLLQHLAENDPNRYGTPPAQKEAVEALPAVKIDETLQCSVCLEDFEIGTEAK
EMPCKHKFHSECILPWLELHSTCPVCRHQLPSDESKVENVTGNTNAAQSSDTRNENGRRF
PVSLPWPLSGLFTSGTQSSNGNSSSTTTSSSGNANSNAHMHDD

Transcript Sequence

Gene sequence data has not been registered.